Microbiology Chapter 4- Prokaryotes

25 July 2022
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Distinguishing Characteristics- Prokaryotes ("Prenucleus")
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1. DNA not enclosed w/in a membrane. Singular circularly arranged chromosome. 2. NOT associated with histones 3. Lack membrane-enclosed organelles 4. Cell walls almost always have complex polysaccharide peptidoglycan 5. Binary fission. (DNA copies, split into two)
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Distinguishing Characteristics- Eukaryotes ("True Nucleus")
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1. DNA is in nucleus and in multiple chromosomes. Separated from cytoplasm by a nuclear membrane. 2. DNA associated with proteins- Histones and Non-histones. 3. Membrane-enclosed organelles: Mitochondria, ER, Golgi Complex, Lysosomes and Chloroplasts. 4. If cell walls= simple! 5. Mitosis
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Bacteria range in size from _____ in diameter and ______ in length.
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0.2-2.0 micrometers -diameter 2-8 micrometers- length
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What are the 3 possible shapes of bacteria?
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Coccus: spherical Bacillus: rod-shaped Spiral
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Cocci are usually ______ and are elongated and flattened on one side
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Round
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Cocci ______ to reproduce
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divide!
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After division of Cocci, cells can remain attached. If they remain in pairs= ________ Remain in chainlike patterns= _______ Divide in 2 plains and remain in groups of 4 =___ Divide in 3 planes & remain in groups of 8=_____ Divide in many planes & form clusters=________
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Pairs= diplococci Patterns= streptococci Groups of 4= tetrads Groups of 8= sarcinae Clusters= staphylococci
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Bacilli appear as _______ and divide only across their short axis
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single rods
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Diplobacilli
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Appear in pairs after division
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Streptobacilli
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Occur in chains
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Coccobacilli
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Oval, look very similar to coci
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"Bacillus" has 2 meanings:
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1. Bacterial shape 2. Specific genus
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Vibrios
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Bacteria that look like curved rods
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Spirilla
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Helical shape. Rigid bodies. Propeller-like external appandages (Flagella)
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Spirochetes
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Helical AND Flexible Move by axial fillaments (resemble flagella but are internal)
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In addition to the main 3 shapes, there are...
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1. Stella: star-shaped 2. Haloarcula: rectangular, flat 3. Triangular
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Shape is determined by ______
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Heredity
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Most bacteria are monomorphic, meaning that they...
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maintain a single shape.
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T/F: Environmental conditions can alter shape.
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True!
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Some bacteria are pleomorphic, meaning that they...
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Can have many shapes
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The typical structure of a Prokaryotic cell is made of what 3 components?
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1. Structures external to the cell wall 2. The cell walll 3. Structures internal to the cell wall
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Structures external to the cell wall include:
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Glycocalyx Flagella Axial Fillaments Pili Fimbriae
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Describe the Glycocalyx
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-Substance secreted by prokaryotes on the surface. -General term used for substances that surround cells - is viscous (sticky) -Gelatinous polymer -Composed of polysaccharide OR polypeptide OR both -Made inside the cell then secreted out
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Something is a "Capsule" if...
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-the substance is organized and firmly attached to the cell wall
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The presence of a capsule can be detected by...
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Negative staining
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Something is a "Slime Layer" if...
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-it is unorganized and loosely attached to cell wall
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Some species of capsules contribute to ____ and protect _____
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-bacterial virulence -pathogenic bacteria from phagocytosis by the cells of the host
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Glycocalyx is a very important component of _____
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Biofilms
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Extracellular Polymeric Substance
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Glycocalyx that helps cells in a biofilm attach to their target environment and to each other. -protects cells within it -facilitates communication between the cells -enables cell survival by attaching to various surfaces
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Glycocalyx can protect a cell against...
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Dehydration and viscosity can prevent the nutrients from leaving the cell
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Flagella
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-long, filamentous appendages that propel bacteria
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Bacteria without Flagella are called:
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Atrichous
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2 types of Flagella:
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1. Peritichous: distributed over the entire cell 2. Polar: @ one or both poles/ends of cells
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If the flagella are POLAR, they can be...
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1. Monotrichous: single flagellum @ one pole 2. Lophotrichous: a tuft of flagella from one pole 3. Amphitichous: Flagella @ both poles
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What are the 3 basic parts of Flagella?
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1. Filament 2. Hook 3. Basal Body
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Filament
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-long, outermost region -constant in diameter -contains globular protien flagella in chains that intertwine/form a helix around hollow core -not covered by membrane/sheath -attached to slightly wider HOOK
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Basal Body
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-anchors flagellum to the cell wall and plasma membrane -composed of a small central rod inserted in a series of rings
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Gram Negative Basal Body
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-2 pairs of rings 1. outer pair anchored to portions of cell wall 2. inner pair anchored to plasma membrane
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Gram Positive Basal Body
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Only inner pair is present
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Each flagellum is semirigid and helical, and move by ________.
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Rotation from the basal body. **Rotation is either clockwise or counterclockwise
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Bacterial cells can alter the ____ & _____ of rotation of flagella, which makes it capable of patterns of ______.
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-Speed and Direction -Motility
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Motility
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-Ability of an organism to move by itself -Enables bacterium to move toward a favorable environment or away from bad.
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Movement in one direction for any length of time =
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"Run" or "Swim"
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"Runs are interrupted by random changes called:
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"Tumbles"
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"Tumbles" are caused by
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Reversal of flagella rotation
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Taxis
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The movement of bacterium toward/away from particular stimulus
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2 types of stimuli that spur Taxis
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1.Chemotaxis: chemicals 2. Phototaxis: light
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Motile bacteria have receptors to pick up chemical stimuli such as _______, and signals pass the information to flagella.
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Oxygen Ribose Galactose
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2 types of signals
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1. Positive Chemotactic Signal= "Attractant"- move toward stimulus with many runs, few tumbles 2. Negative Chemotactic Signal= "Repellent"- frequency of tumbles increases as bacteria move away
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H Antigen
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Flagellar protein. Useful for distinguishing among serovars- variations within a species of gram-negative bacteria.
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Axial Fillaments
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-Anchored at one end of spirochete -structure similar to flagella -movement similar to corkscrew: enables bacterium to move more effectively through bodily fluids
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Spirochetes
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-unique structure and motility -move by axial fillaments or endoflagella -bundles fibrils @ ends of the cell beneath an outer sheath/spiral around the cell
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__________ bacteria have hairlike appendages that are shorter, straighter, thinner than flagella and are used for attachment/trasnfer of DNA
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Gram Negative
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Fimbriae
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-Can occur @ poles or evenly distributed over entire surface of cell -# from 2-hundreds per cell -adhere to each other/surfaces -involved in forming biofilms -help bacteria adhere to epithelial surfaces in body
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Pili
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-longer than fimbriae -small # in cell -involved in motility and DNA transfer (twitching and gliding motility) -used to bring bacteria together to allow DNA transfer (conjugation) = Conjugation Pili
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Twitching Motility
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Pili extend by addition of subunits of pilun, make contact with surface, then retracts as subunits are dissembled. -"Gripping Hook Model": results in short, jerky movements
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Gliding Motility
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Smooth, gliding movement of myxobacteria. -allows microbes to travel in environments with low water content (biofilms and soil)
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Cell Wall
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-Complex, semirigid structure repsonsible for shape of the cell -surrounds plasma membrane and protects it from adverse changes. -almost all prokaryotes have cell walls -helps maintain shape/serves as point of anchorage for flagella -contributes to ability of species to cause disease -site of action for antibiotics
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Major Function of the Cell Wall
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To prevent bacterial cells from rupturing when water pressure is greater than it is outside the cell.
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The cell wall is composed of a macromolecule network called:
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Peptidoglycan
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Peptidoglycan
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-components of it are assembled in the cell wall -forms "backbone" by alternating NAM and NAH molecules in linked rows -Adjacent rows are linked by polypeptides -4 amino acids are attached to the "backbone" and alternate in D and L patterns.
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_________ interacts with the amino acid patterns by peptide cross-bridges.
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Penicilin
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Peptide Cross-Bridges...
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Weakens cell wall so the cell undergoes lysis.
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Lysis
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Destruction caused by rupture of plasma membrane and loss of cytoplasm.
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Gram Positive Cell Walls
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-many layers of peptidoglycan- thick, rigid structure -contain teichoic acids (primary alcohols)
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2 classes of Teichoic Acids
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1.Lipoteichoic: spans peptidoglycan and is linked to plasma membrane 2. Wall Teichoic: linked to peptidoglycan layer
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Negatively charged Teichoic Acids
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May bond and regulate movement of cations
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Teichoic Acids are involved in...
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-Cell growth -Preventing wall breakdown -Preventing cell lysis
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Cell walls of Gram Positive Streptococchi are covered with...
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-Polysaccharides -grouped into medically significant types
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Gram Negative Cell Walls
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-Thin layer of peptidoglycan and an outer membrane -Peptidoglycan is bonded to lipoproteins in outer membrane -also in the periplasm (gel-like fluid b/w outer and plasma membrane) -do not contain Teichoic Acids -Low amounts of Peptidoglycan = high susceptibility to mechanical breakage
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Outer membrane of Gram Negative Cell Walls contains ______
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Lipopolysaccharides (LPS)
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Specialized functions of the Outer Wall
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-Strong (-) charge = ability to evade phagocytosis -provides barrier to certain antibiotics (penicillin), digestive enzymes (lysozome), detergents, heavy metals, bile salts and some dyes.
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The outer wall is slightly permeable because...
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Porins: proteins that form channels and permit the passage of molecules (nucleotides. disaccharides, peptides, amino acids, vitamin B12 and Fe)
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LPS of the outer membrane
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-large complex molecule -3 components: 1. Lipid A 2. Core polysaccharide 3. O polysaccharide
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Lipid A
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-Lipid portion of LPS -embedded in top layer of outer membrane -released by gram-negative bacteria when they die (functions as an endotoxin) -repsonsible for symptoms associated with infections by gram negative bacteria (fever, shock, etc)
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Core Polysaccharide
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-Attached to Lipid A, contains unusual sugars -structural role = to provide stability
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O Polysaccharide
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-extends outward from core p. -composed of sugar molecules -functions as an antigen -useful for distinguishing species of gram-negative bacteria
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The Gram Stain mechanism is based on...
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Differences in the structure of the cell walls of Gram +/- and how they react to the reagents
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__________ stains both +/- purple b/c the dye enters the cytoplasm of both cells.
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Crystal Violet
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Iodine (mordant) causes
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Crystals to form
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Alcohol Wash and Gram +
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Dehydrates the peptidoglycan, making it impermeable to the c.violet-iodine
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Alcohol wash and Gram -
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Dissolves the outer membrance and leaves holes in peptidoglycan layer. -C. violet-iodine layer diffuses
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Atypical Cell Walls
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-No walls or very little material
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Archaea
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-lack walls or have walls that contain polysaccharides/proteins -NOT peptidoglycan
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Enzymatic Treatment
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-Chemicals in cell wall usually prevent harm -Can be damaged by exposure to Lysozyme
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Lysozyme
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-digestive enzyme -occurs naturally in some eukaryotic cells - in TEARS, mucus and saliva -active on the major cell wall components of most Gram + bacteria **Catalyzes hydrolysis of the bonds b/w the sugars in the repeating disaccharide "backbone" or peptidoglycan -completely destroys gram + wall
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If lysis does not occur, the contents of the cell may remain surrounded by the plasma membrane= ?
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Protoplast
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Those in genus Proteus- can lose their cell walls and swell into irregularly shaped cells =
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L Forms
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L Forms
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-may form spontaneously or in repsonse to penicillin -can live/divide repeatedly
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When Lysozyme is applied to Gram - walls...
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-wall is not destroyed to same extent as + -Part of outer membrane remains
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After Lysozyme, the cellular contents, plasma membrane, and remaining outer wall =
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Spheroplast
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Protoplasts and Spheroplasts ______ in pure water or very dilute salt/sugar sol'ns b/c the water molecules rapidly move into/enlarge the cell =
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Osmotic Lysis
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Plasma Membrane
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-thin structure lying inside the cell wall and enclosing the cytoplasm -consists primarily of phospholipids -e- micrographs- look like 2-layered structures -phospholipid molecules are arranged in 2 parallel rows = lipid bilayer
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Most important function of Plasma Membrane
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Serve as a selective barrier through which materials enter/exit the cell **Selective permeability
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Movement Across Membranes includes...
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1. Passive Processes 2. Osmosis
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Passive Processes: Simple Diffusion
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Net movement of molecules/ions from high concen. to low concen. until ions/molecules are evenly distributed -Cell does NOT expend energy ***Equillibrium
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Passive Processes: Facilitated Diffusion
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Proteins function as channels/carriers that facilitate movement of ions across membranes. -Cell does NOT expend energy -Uses transporters
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Osmosis
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-Net movement of solvent molecules across a selectively permeable membrane. High to low concen. -Chief Solvent = Water!
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Osmotic Pressure
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Pressure required to prevent movement of pure water into a solution containing some solutes
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3 types of osmotic solutions
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1. isotonic 2. hypotonic 3. hypertonic
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Isotonic
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-overall concentration of solutes = that inside the cell -water leaves/enters @ same rate -Cells contents are in equillibrium with sol'n outside the cell wall
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Hypotonic
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-Concentration of Solutes < inside -most bacteria live in hypotonic sol'ns -cell wall resists further osmosis and protects from lysis
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Hypertonic
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-higher concentration of solutes than inside -Most bacteria in this sol'n shrink or plassmolyze b/c water leaves the cell by osmosis
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Active Processes
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-Active Transport -the cell uses energy in the form of ATP to move substances across membrane
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Cytoplasm
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-substance of the cell inside plasma membrane - ~80% water -Primarily proteins, carbs, lipids, inorganic ions & low-molec weight carbons -thick, aqueous, semitransparent, elastic -major structures: nucleoid, ribosomes, reserve deopsits -protein filaments -LACK cytoskeleton & cytoplasmic streaming
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Ribosomes
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-Site of protein synthesis -2 subunits consisting of protein and rRNA -smaller/less dense than euk. -70S -some antibiotics work by inhibiting protein synthesis on prok. ribosomes
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Euk. Ribosomes =
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80S
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'S' refers to...
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Svedleberg Units. -indicate the relative rate of sedimentation during ultra high speed centrifugation.
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Inclusions (Types)
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-Metachromatic Granules -Polysaccharide Granules -Lipid -Sulfur Granules -Carboxysomes -Gas Vacuoles -Magnetosomes
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Inclusions
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Reserve deposits within the cytoplasm
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Meta Chromatic Granules
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-large inclusions -sometimes stain red with blue dyes -known as volutin collectively -found in algae, fungi, protozoa, bacteria
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Polysaccharide Granule
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-consist of glycogen and Starch -presence is demonstrated when iodine is applied to the cells - granules appear reddish brown (glycogen) and blue (starch) with iodine
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Lipid Inclusions
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-revealed by staining cells with fat soluble dyes (sudan)
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Sulfur Granules
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-derive energy by oxidizing sulfur/sulfur- containing compounds -serve as energy reserve
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Carboxysomes
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-contain enzyme ribulose 1,5 diphosphate carboxylase -in nitrifying bacteria, cyanobacteria, thiobacilli
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Gas Vacuoles
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-hollow cavities -maintain buoyancy
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Magnetosomes
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-inclusions of Fe3O4 (Iron Oxide) -formed by several gram- negative bacteria -may protect cell against hydrogen peroxide accumulation
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Endospores
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-specialized "resting" cells formed by gram + bacteria when essential nutrients are depleted. -highly durable dehydrated cells with thick walls and additonal layers -found internal to bacterial cell membrane -can survive extreme heat, lack of water and exposure to toxic chemicals/radiaton in environment -** 1 per cell
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Sporulation/Sporogenesis
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Process of endospore formation within a vegetative cell -begins when a key nutrient becomes scarce/unavailable
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Germination
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-Process by which endospores return to a vegetative state -can remain dormant for thousands of years